Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015905168.1_cds_XP_016455350.1_49287
CDS Infomation

[gene=LOC107779433] [db_xref=GeneID:107779433] [protein=protein SPT2 homolog] [protein_id=XP_016455350.1] [location=join(7576..7596,7872..8089,8533..8650,8979..9056,9161..9284,9384..9856,10018..10295,10647..10733,10935..11046)] [gbkey=CDS]
Sequence

ATGCGGGGATATGAAGGAGATGAATATGATGATTATTTGGATGAATACGAGGATGAAGGT
GAGGAGGAAGAGGCTGGTGAAGATGAATATGAGGAGGAAGAGCCTCAACAGCCTTCACGG
GAGTTGTTAGAGTACCTCGAGCTGAGGCAACGGTTAAAAGAAGATATCAGGAAGCAGAGA
AAGAAAGAACTAGGCGGTGGTTCTCGCGAAATTAAAAAGAATGCTTCATCCAGAGATAAT
TTTGGTTCCTTCTTTGGACCTTCACAGCCTGTTATCTCCCAAAGAGTAATCCAAGAAAGC
AAGTCACTACTGGAGAATCCAAATCTGGCAGCGAAAGTCATGAAGTCTAGCCATCCTAGC
AATAAGAGCTCTGCTTCAAAACCTGCAGTATCAAAAACTTCCACCAGCAACCATGCAACA
AAAGTCACAAATGGGTTAAAAAGAAAGATTGATATGGTGAAAAATACAAGGGACTATTCA
TTTCTATTATCTGATGATGCTGAACTTCCTGGTCCATCCAAAGGTCCTTTAACACAGAAA
GTCTCTGCCCCTAATTATGATGCACGGTTGGTTCAGTGTCCGAGTGGCAAGCAGTCTTCA
AGTAATACTGGGAGAAAGCTTCTAGATGATCGTGAAGTGAAAAGAGGCAGCCAAATGCAA
CCTAAAGCTGCGATTCAGAAATCGGTGTCTATTAATAGACCGACTCAACCATCATTAGAC
TCTAGGAAACAGTTCAGTAGCAGTAATGGAAGTGGGCCTGGGAGGCCTTTGGGGCCCAAA
GGGGTTCCCACCAAGGTTACAGGGAATCCAAATGATAAGAAATTTTTGGCACCAGGCGCC
AAGAGTAATGTGGCTGCTTTACATAGGCCAACCCCTTCAAAGATGCTACCCTCTGTACGA
AGGCAATCTTTGGTACAGAATAGGGTTCCTTTGGAATCTGGAAAGTCAAAAGTGATGCCA
AAACAAGGCGTGCCCGTCTCCAGACCTCAGGGAGTGATTCAGAAACAACCAGTCTCCTCG
TCTAGACCTCAGATAAAGCCACCACCTCCTAGAAATATAGCTCGTCCCTTGGAGGATAGG
CGCCCAGCGCTTCAGCAAAAAGAAGAGAGACGTCCAGCACTTCAGCAGAGAGATGACAGG
CGACCAGCACTTGAGCGAAAAGAAGAGAGGCGCCCAGCTCTTCAGCAAAGAGATGACAGG
CGTCCAGCACCTATTCGAAAAGAAGATAGGCGCCCAGCAAGAAAACCAATGAGACATGAT
GAAGAAGAAGATGGAGCCGAAGCCATTAGTTTGATTAGGAAGATGTTTGGGTATAATCCT
AACAGGTATCGCGATGAAGATGATGATAGTGATATGGAGGCTAATTTTGATGAGATATTA
AAGGAAGAAAGGCGGAGTGCGAAAATAGCAAGGAAGGAGGATGAAGAAGAACTTCGGAAG
ATAGAAGAAGAAGAAAGGAGGGAGAGATTGAGAAAACAGGCAAAGAAGCGCAAGTTGAGC
CATCAATGA

Peptide Sequence

PEP ID

XP_016455350.1
PEP Infomation

PREDICTED: protein SPT2 homolog [Nicotiana tabacum]
Sequence

MRGYEGDEYDDYLDEYEDEGEEEEAGEDEYEEEEPQQPSRELLEYLELRQRLKEDIRKQR
KKELGGGSREIKKNASSRDNFGSFFGPSQPVISQRVIQESKSLLENPNLAAKVMKSSHPS
NKSSASKPAVSKTSTSNHATKVTNGLKRKIDMVKNTRDYSFLLSDDAELPGPSKGPLTQK
VSAPNYDARLVQCPSGKQSSSNTGRKLLDDREVKRGSQMQPKAAIQKSVSINRPTQPSLD
SRKQFSSSNGSGPGRPLGPKGVPTKVTGNPNDKKFLAPGAKSNVAALHRPTPSKMLPSVR
RQSLVQNRVPLESGKSKVMPKQGVPVSRPQGVIQKQPVSSSRPQIKPPPPRNIARPLEDR
RPALQQKEERRPALQQRDDRRPALERKEERRPALQQRDDRRPAPIRKEDRRPARKPMRHD
EEEDGAEAISLIRKMFGYNPNRYRDEDDDSDMEANFDEILKEERRSAKIARKEDEEELRK
IEEEERRERLRKQAKKRKLSHQ

Transcript Sequence

Gene sequence data has not been registered.